Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf445 domain-containing protein | E1729_04785 | Not Available | - | 975873 - 977153 | 48202.6 |
| multidrug efflux mfs transporter mdtm | E1729_04790 | Not Available | - | 977194 - 978426 | 44583.0 |
| hypothetical protein | E1729_04795 | Not Available | - | 978372 - 978557 | 7002.86 |
| hypothetical protein | E1729_04800 | Not Available | + | 978684 - 978896 | 7803.35 |
| rpn family recombination-promoting nuclease/putative transposase | E1729_04805 | Not Available | + | 978893 - 979849 | 37205.9 |
| plp-dependent aminotransferase family protein | E1729_04810 | Not Available | - | 980092 - 981504 | 53019.7 |
| duf1127 domain-containing protein | E1729_04815 | Not Available | + | 981681 - 981845 | 6864.37 |
| endoribonuclease syme | E1729_04820 | Not Available | - | 981888 - 982226 | 12383.9 |
| type i restriction endonuclease subunit r | E1729_04825 | Not Available | - | 982441 - 985704 | 124940.0 |
| restriction endonuclease subunit s | E1729_04830 | Not Available | - | 985799 - 987103 | 48974.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism