Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | E1729_04680 | Not Available | + | 955117 - 957753 | 96576.0 |
| type 1 fimbriae minor subunit fimf | E1729_04685 | Not Available | + | 957763 - 958293 | 18764.4 |
| type 1 fimbriae minor subunit fimg | E1729_04690 | Not Available | + | 958306 - 958809 | 17433.4 |
| type 1 fimbriae d-mannose specific adhesin fimh | E1729_04695 | Not Available | + | 958829 - 959731 | 31428.1 |
| gluconate permease gntp | E1729_04700 | Not Available | - | 959905 - 961248 | 47141.0 |
| mannonate dehydratase | E1729_04705 | Not Available | + | 961588 - 962772 | 44826.5 |
| fructuronate reductase | E1729_04710 | Not Available | + | 962853 - 964313 | 53659.3 |
| uxu operon transcriptional regulator | E1729_04715 | Not Available | + | 964528 - 965301 | 29291.8 |
| irad leader peptide | E1729_04725 | Not Available | + | 966820 - 966903 | 3016.48 |
| anti-adapter protein irad | E1729_04730 | Not Available | + | 966900 - 967292 | 14747.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism