Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | E1729_04625 | Not Available | - | 944751 - 945731 | 36813.9 |
| yjht family mutarotase | E1729_04630 | Not Available | - | 945795 - 946901 | 39575.2 |
| n-acetylneuraminic acid outer membrane channel protein nanc | E1729_04635 | Not Available | - | 946921 - 947637 | 27889.4 |
| isl3-like element isec53 family transposase | E1729_04645 | Not Available | - | 949319 - 950539 | 47011.0 |
| clbs/dfsb family four-helix bundle protein | E1729_04650 | Not Available | - | 950558 - 951076 | 19590.5 |
| tyrosine recombinase | E1729_04655 | Not Available | + | 951119 - 951583 | 17869.6 |
| type 1 fimbriae regulatory protein fime | E1729_04660 | Not Available | + | 952061 - 952657 | 23117.6 |
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | E1729_04665 | Not Available | + | 953136 - 953684 | 18171.3 |
| type 1 fimbrial protein | E1729_04670 | Not Available | + | 953749 - 954288 | 19374.4 |
| type 1 fimbriae chaperone fimc | E1729_04675 | Not Available | + | 954325 - 955050 | 26660.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism