Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starvation-sensing protein rspa | E1729_04570 | Not Available | + | 932200 - 933414 | 45985.0 |
| zn-dependent oxidoreductase | E1729_04575 | Not Available | + | 933426 - 934445 | 36582.1 |
| mfs transporter | E1729_04580 | Not Available | + | 934503 - 935870 | 49350.7 |
| mannitol dehydrogenase family protein | E1729_04585 | Not Available | + | 935959 - 937419 | 53817.4 |
| putative selenium delivery protein ydfz | E1729_04590 | Not Available | - | 937455 - 937658 | 7276.83 |
| gntr family transcriptional regulator | E1729_04595 | Not Available | - | 937835 - 938521 | 26566.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | E1729_04600 | Not Available | - | 938610 - 939356 | 27248.5 |
| peptidyl-dipeptidase dcp | E1729_04605 | Not Available | + | 939493 - 941538 | 77645.8 |
| diguanylate cyclase dgcz | E1729_04615 | Not Available | + | 942045 - 942935 | 33881.4 |
| hypothetical protein | E1729_04620 | Not Available | + | 943125 - 944168 | 38828.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism