Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voltage-gated clc-type chloride channel clcb | E1729_04510 | Not Available | - | 921621 - 922913 | 45631.0 |
| tat proofreading chaperone dmsd | E1729_04515 | Not Available | - | 923075 - 923689 | 23349.8 |
| dimethyl sulfoxide reductase anchor subunit | E1729_04520 | Not Available | - | 923732 - 924586 | 30544.6 |
| dimethylsulfoxide reductase subunit b | E1729_04525 | Not Available | - | 924588 - 925205 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | E1729_04540 | Not Available | - | 926846 - 929272 | 89519.7 |
| duf1161 domain-containing protein | E1729_04545 | Not Available | - | 929471 - 929776 | 10605.3 |
| ynfc family lipoprotein | E1729_04550 | Not Available | + | 929884 - 930594 | 26515.3 |
| spermidine n1-acetyltransferase | E1729_04555 | Not Available | - | 930597 - 931157 | 21902.3 |
| duf1283 family protein | E1729_04560 | Not Available | - | 931192 - 931533 | 13002.5 |
| ynfa family protein | E1729_04565 | Not Available | + | 931668 - 931994 | 11920.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism