Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein slyb | E1729_04250 | Not Available | - | 867824 - 868291 | 15628.7 |
| anhydro-n-acetylmuramic acid kinase | E1729_04255 | Not Available | + | 868565 - 869674 | 39512.7 |
| c-type lysozyme inhibitor | E1729_04260 | Not Available | + | 869772 - 870101 | 12572.2 |
| pyridoxamine 5'-phosphate oxidase | E1729_04265 | Not Available | + | 870160 - 870816 | 25546.6 |
| tyrosine--trna ligase | E1729_04270 | Not Available | + | 870945 - 872219 | 47529.6 |
| pyridoxal kinase pdxy | E1729_04275 | Not Available | + | 872281 - 873141 | 31204.8 |
| glutathione transferase gsta | E1729_04280 | Not Available | - | 873185 - 873790 | 22869.6 |
| dipeptide/tripeptide permease dtpa | E1729_04285 | Not Available | - | 873896 - 875398 | 54042.4 |
| endonuclease iii | E1729_04290 | Not Available | - | 876009 - 876644 | 23579.7 |
| electron transport complex subunit e | E1729_04295 | Not Available | - | 876644 - 877339 | 24462.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism