Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sufs | E1729_04045 | Not Available | + | 832035 - 833255 | 44394.3 |
| cysteine desulfuration protein sufe | E1729_04050 | Not Available | + | 833268 - 833684 | 15759.2 |
| l,d-transpeptidase ldte | E1729_04055 | Not Available | + | 833832 - 834836 | 36040.4 |
| major outer membrane lipoprotein | E1729_04060 | Not Available | - | 834899 - 835135 | 8323.95 |
| pyruvate kinase i | E1729_04065 | Not Available | - | 835446 - 836858 | 50732.5 |
| fumarate hydratase fumd | E1729_04070 | Not Available | + | 837415 - 837624 | 7907.85 |
| ferredoxin-like protein | E1729_04075 | Not Available | + | 838080 - 838706 | 22357.2 |
| aldehyde ferredoxin oxidoreductase | E1729_04080 | Not Available | + | 838727 - 840829 | 77866.8 |
| ydhw family putative oxidoreductase system protein | E1729_04085 | Not Available | + | 840833 - 841480 | 24455.8 |
| 4fe-4s dicluster domain-containing protein | E1729_04090 | Not Available | + | 841544 - 842212 | 25058.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism