Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NUBRI-E
Accession NumberSOYU00000000.1
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin family protein | E1729_03940 | Not Available | - | 809755 - 810048 | 10700.7 |
| fad-dependent oxidoreductase | E1729_03945 | Not Available | - | 810045 - 811334 | 45830.6 |
| electron transfer flavoprotein subunit alpha | E1729_03950 | Not Available | - | 811389 - 812327 | 33982.0 |
| electron transfer flavoprotein | E1729_03955 | Not Available | - | 812347 - 813111 | 27450.0 |
| arac family transcriptional regulator | E1729_03960 | Not Available | + | 813427 - 814338 | 34868.2 |
| acyl-coa dehydrogenase | E1729_03965 | Not Available | - | 814381 - 815532 | 43004.6 |
| acetate coa-transferase ydif | E1729_03970 | Not Available | - | 815546 - 817141 | 57537.6 |
| type i 3-dehydroquinate dehydratase | E1729_03975 | Not Available | - | 817288 - 818046 | 27468.2 |
| quinate/shikimate dehydrogenase | E1729_03980 | Not Available | - | 818077 - 818943 | 31230.6 |
| mfs transporter | E1729_03985 | Not Available | - | 818955 - 820220 | 46078.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism