Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. NGE-022
Accession NumberQFXA00000000.1
Gene Summary
Adenine Count
1251495 bp
Thymine Count
1254072 bp
Guanine Count
1280241 bp
Cytosine Count
1275789 bp
Genome Length
5061598 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toxin | DI389_00065 | Not Available | + | 8574 - 8957 | 14296.2 |
| hypothetical protein | DI389_00070 | Not Available | + | 8948 - 9436 | 18043.5 |
| duf957 domain-containing protein | DI389_00075 | Not Available | + | 9448 - 9645 | 7420.72 |
| duf4942 domain-containing protein | DI389_00080 | Not Available | + | 9742 - 10587 | 32625.2 |
| Trna-met | Not Available | Not Available | + | 10686 - 10761 | Not Available |
| mismatch-specific dna-glycosylase | DI389_00090 | Not Available | + | 10886 - 11392 | 18674.5 |
| Ncrna_class:other | Not Available | Not Available | + | 12179 - 12312 | Not Available |
| rna polymerase sigma factor rpod | DI389_00095 | Not Available | - | 11471 - 13312 | 70241.3 |
| rna polymerase subunit sigma | DI389_00100 | Not Available | - | 13371 - 13493 | 4564.46 |
| dna primase | DI389_00105 | Not Available | - | 13507 - 15252 | 65568.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism