Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. JPH493
Accession NumberLSNZ00000000.1
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative acref/envcd operon repressor | HMPREF3040_00424 | Not Available | - | 401622 - 402284 | 25185.8 |
| acriflavine resistance protein a | HMPREF3040_00425 | Not Available | + | 402683 - 403840 | 41278.9 |
| inner membrane multidrug efflux protein bpeb | HMPREF3040_00426 | Not Available | + | 403852 - 406956 | 111428.0 |
| hypothetical protein | HMPREF3040_00427 | Not Available | + | 407209 - 407430 | 7452.14 |
| general l-amino acid-binding periplasmic protein aapj | HMPREF3040_00428 | Not Available | + | 407861 - 408886 | 37034.8 |
| general l-amino acid transport system permease protein aapq | HMPREF3040_00429 | Not Available | + | 408936 - 410135 | 43897.7 |
| general l-amino acid transport system permease protein aapm | HMPREF3040_00430 | Not Available | + | 410205 - 411248 | 39279.1 |
| general l-amino acid abc transporter, atp-binding protein aapp | HMPREF3040_00431 | Not Available | + | 411256 - 412014 | 28580.9 |
| Trna-thr | Not Available | Not Available | + | 412232 - 412307 | Not Available |
| hypothetical protein | HMPREF3040_00434 | Not Available | - | 412351 - 412854 | 18758.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism