Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. JPH493
Accession NumberLSNZ00000000.1
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putrescine-binding periplasmic protein | HMPREF3040_04231 | Not Available | + | 4027134 - 4028321 | 43903.4 |
| polyamine abc transporter, atp-binding protein | HMPREF3040_04232 | Not Available | + | 4028335 - 4029549 | 44820.7 |
| putrescine transport system permease protein poth | HMPREF3040_04233 | Not Available | + | 4029559 - 4030503 | 35256.4 |
| putative spermidine/putrescine abc transporter, permease protein potc | HMPREF3040_04234 | Not Available | + | 4030500 - 4031345 | 30445.3 |
| hypothetical protein | HMPREF3040_04235 | Not Available | + | 4031405 - 4031893 | 18519.1 |
| 23s rrna (uracil-5-)-methyltransferase rumb | HMPREF3040_04236 | Not Available | + | 4031934 - 4033061 | 41948.1 |
| putative sugar-specific permease, sgat/ulaa | HMPREF3040_04237 | Not Available | + | 4033342 - 4034685 | 48565.7 |
| pts system, lactose/cellobiose specific iib subunit | HMPREF3040_04238 | Not Available | + | 4034707 - 4035027 | 11814.4 |
| arylsulfatase | HMPREF3040_04239 | Not Available | + | 4035040 - 4036521 | 57053.6 |
| arginine abc transporter, periplasmic arginine-binding protein artj | HMPREF3040_04240 | Not Available | - | 4036572 - 4037354 | 28753.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism