Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. JPH493
Accession NumberLSNZ00000000.1
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01579 | Not Available | - | 1520503 - 1520805 | 11325.8 |
| outer membrane protein | HMPREF3040_01580 | Not Available | + | 1521404 - 1522612 | 43903.3 |
| hypothetical protein | HMPREF3040_01581 | Not Available | - | 1522613 - 1522996 | 14789.3 |
| hypothetical protein | HMPREF3040_01582 | Not Available | + | 1523040 - 1523183 | 5444.42 |
| protein in dcm-seru intergenic region | HMPREF3040_01583 | Not Available | + | 1523204 - 1524055 | 31178.1 |
| heavy metal sensor kinase | HMPREF3040_01584 | Not Available | - | 1524163 - 1525521 | 50788.7 |
| transcriptional activator protein irlr | HMPREF3040_01585 | Not Available | - | 1525521 - 1526303 | 29472.5 |
| hydroxyisourate hydrolase | HMPREF3040_01586 | Not Available | + | 1526325 - 1526738 | 15537.6 |
| tat pathway signal sequence domain protein | HMPREF3040_01587 | Not Available | + | 1526847 - 1527851 | 37332.8 |
| ferric reductase like transmembrane component | HMPREF3040_01588 | Not Available | + | 1527852 - 1528487 | 24068.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism