Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. ICBECG2
Accession NumberPEDQ00000000.2
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | CSB64_003050 | Not Available | + | 660040 - 660690 | 25254.7 |
| invasion protein | CSB64_003055 | Not Available | - | 660751 - 661044 | 11160.4 |
| helix-turn-helix transcriptional regulator | CSB64_003060 | Not Available | - | 661046 - 661546 | 19131.0 |
| prgh/eprh family type iii secretion apparatus protein | CSB64_003065 | Not Available | + | 661805 - 662986 | 45033.3 |
| type iii secretion system needle complex protein | CSB64_003070 | Not Available | + | 663000 - 663239 | 9038.44 |
| type iii secretion system inner rod subunit scti | CSB64_003075 | Not Available | + | 663259 - 663591 | 12241.6 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | CSB64_003080 | Not Available | + | 663588 - 664322 | 27789.9 |
| hypothetical protein | CSB64_003095 | Not Available | + | 665358 - 665567 | 8136.42 |
| response regulator transcription factor | CSB64_003100 | Not Available | + | 665790 - 666422 | 23427.7 |
| lytic transglycosylase domain-containing protein | CSB64_003105 | Not Available | - | 666440 - 666943 | 19271.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism