Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. E4223
Accession NumberSSOO00000000.1
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| low affinity tryptophan permease tnab | E5E93_02735 | Not Available | - | 547768 - 549015 | 45227.3 |
| tryptophanase | E5E93_02740 | Not Available | - | 549106 - 550521 | 52776.4 |
| tryptophanase leader peptide | E5E93_02745 | Not Available | - | 550742 - 550816 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | E5E93_02750 | Not Available | - | 551059 - 552423 | 49247.8 |
| membrane protein insertase yidc | E5E93_02755 | Not Available | - | 552529 - 554175 | 61543.5 |
| membrane protein insertion efficiency factor yidd | E5E93_02760 | Not Available | - | 554178 - 554435 | 9381.61 |
| ribonuclease p protein component | E5E93_02765 | Not Available | - | 554399 - 554758 | 13790.0 |
| 50s ribosomal protein l34 | E5E93_02770 | Not Available | - | 554775 - 554915 | 5380.74 |
| hypothetical protein | E5E93_02775 | Not Available | - | 555145 - 555225 | 3111.7 |
| chromosomal replication initiator protein dnaa | E5E93_02780 | Not Available | + | 555522 - 556925 | 52553.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism