Escherichia coli str. E4223

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. E4223 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which coincides with the average body temperature of many warm-blooded hosts, indicating a potential adaptation to a host-associated habitat. E. coli str. E4223 is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions, which further supports its versatility in various host environments. The strain's association with host organisms suggests that it may play a role in the microbiota of the intestinal tract, contributing to essential metabolic functions or interactions with the host immune system. This adaptability to different oxygen levels may facilitate its survival in diverse microenvironments within the host, including those that experience fluctuations in oxygen availability. Understanding the traits of E. coli str. E4223 can provide insights into its ecological role, particularly in how it might influence host health or contribute to the microbial community dynamics within the gastrointestinal tract. As a member of the E. coli species, this strain may also help elucidate the complexities of host-microbe interactions, particularly in terms of nutrient utilization and microbial competition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. E4223
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. E4223

Accession NumberSSOO00000000.1

Gene Summary

Adenine Count

1196697 bp

Thymine Count

1191172 bp

Guanine Count

1229268 bp

Cytosine Count

1234068 bp

Genome Length

4851238 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

299 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mdr efflux pump acrab transcriptional activator robaE5E93_20575Not Available+4225554 - 422642333146.8
phosphoglycerate mutase gpmbE5E93_20580Not Available-4226420 - 422706724066.7
non-canonical purine ntp phosphataseE5E93_20585Not Available+4227119 - 422763118213.7
trp operon repressorE5E93_20590Not Available-4227778 - 422810412355.9
murein transglycosylaseE5E93_20595Not Available-4228194 - 423013173388.1
energy-dependent translational throttle protein ettaE5E93_20600Not Available+4230342 - 423200962446.5
trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator nadrE5E93_20605Not Available-4232316 - 423354847334.4
dna repair protein radaE5E93_20610Not Available-4233569 - 423495149445.0
phosphoserine phosphataseE5E93_20615Not Available-4235000 - 423596835044.8
ytjb family periplasmic proteinE5E93_20620Not Available+4236074 - 423671824084.2

Displaying genes 3751 – 3760 of 4281 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites