Escherichia coli str. E4223

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. E4223 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which coincides with the average body temperature of many warm-blooded hosts, indicating a potential adaptation to a host-associated habitat. E. coli str. E4223 is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions, which further supports its versatility in various host environments. The strain's association with host organisms suggests that it may play a role in the microbiota of the intestinal tract, contributing to essential metabolic functions or interactions with the host immune system. This adaptability to different oxygen levels may facilitate its survival in diverse microenvironments within the host, including those that experience fluctuations in oxygen availability. Understanding the traits of E. coli str. E4223 can provide insights into its ecological role, particularly in how it might influence host health or contribute to the microbial community dynamics within the gastrointestinal tract. As a member of the E. coli species, this strain may also help elucidate the complexities of host-microbe interactions, particularly in terms of nutrient utilization and microbial competition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. E4223
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. E4223

Accession NumberSSOO00000000.1

Gene Summary

Adenine Count

1196697 bp

Thymine Count

1191172 bp

Guanine Count

1229268 bp

Cytosine Count

1234068 bp

Genome Length

4851238 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

299 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hydrogenase 4 subunit bE5E93_16350Not Available-3362014 - 336403272733.5
hydrogenase 4 subunit hyfaE5E93_16355Not Available-3364032 - 336464922272.7
thioredoxin-dependent thiol peroxidaseE5E93_16360Not Available-3364902 - 336537217634.9
glycine cleavage system transcriptional repressorE5E93_16365Not Available-3365372 - 336594420769.8
4-hydroxy-tetrahydrodipicolinate synthaseE5E93_16370Not Available+3366090 - 336696831285.9
outer membrane protein assembly factor bamcE5E93_16375Not Available+3366985 - 336801936812.4
phosphoribosylaminoimidazolesuccinocarboxamide synthaseE5E93_16380Not Available+3368232 - 336894526996.5
neutral zinc metallopeptidaseE5E93_16385Not Available+3369113 - 336997631430.0
trna(met) cytidine acetyltransferaseE5E93_16390Not Available+3369991 - 337200674779.5
esteraseE5E93_16395Not Available+3372080 - 337277824829.4

Displaying genes 3021 – 3030 of 4281 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites