Escherichia coli str. E4223

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. E4223 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which coincides with the average body temperature of many warm-blooded hosts, indicating a potential adaptation to a host-associated habitat. E. coli str. E4223 is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions, which further supports its versatility in various host environments. The strain's association with host organisms suggests that it may play a role in the microbiota of the intestinal tract, contributing to essential metabolic functions or interactions with the host immune system. This adaptability to different oxygen levels may facilitate its survival in diverse microenvironments within the host, including those that experience fluctuations in oxygen availability. Understanding the traits of E. coli str. E4223 can provide insights into its ecological role, particularly in how it might influence host health or contribute to the microbial community dynamics within the gastrointestinal tract. As a member of the E. coli species, this strain may also help elucidate the complexities of host-microbe interactions, particularly in terms of nutrient utilization and microbial competition.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. E4223
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. E4223

Accession NumberSSOO00000000.1

Gene Summary

Adenine Count

1196697 bp

Thymine Count

1191172 bp

Guanine Count

1229268 bp

Cytosine Count

1234068 bp

Genome Length

4851238 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

299 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
adenosylcobinamide-gdp ribazoletransferaseE5E93_06725Not Available+1400633 - 140137626397.4
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseE5E93_06730Not Available+1401388 - 140246736918.2
l,d-transpeptidaseE5E93_06735Not Available+1402529 - 140346434463.3
Trna-asnNot AvailableNot Available+1403520 - 1403595Not Available
nitrogen assimilation transcriptional regulatorE5E93_06745Not Available+1403921 - 140483832790.9
hth-type transcriptional regulator cblE5E93_06750Not Available+1404940 - 140589035884.1
Trna-asnNot AvailableNot Available+1405929 - 1406004Not Available
toxic metabolite efflux mate transporter yeeoE5E93_06760Not Available+1406009 - 140765260028.0
Trna-asnNot AvailableNot Available+1407753 - 1407828Not Available
yebc/pmpr family dna-binding transcriptional regulatorE5E93_06770Not Available-1408284 - 140900025868.5

Displaying genes 1451 – 1460 of 4281 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites