Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold shock-like protein cspd | DFS94_RS23820 | Not Available | - | 4828091 - 4828315 | 7969.41 |
| protein yljb | DFS94_RS25830 | Not Available | + | 4828465 - 4828539 | 2707.06 |
| atp-dependent clp protease adapter clps | DFS94_RS23825 | Not Available | + | 4828638 - 4828958 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | DFS94_RS23830 | Not Available | + | 4828989 - 4831265 | 84211.9 |
| Trna-ser | Not Available | Not Available | + | 4831609 - 4831696 | Not Available |
| translation initiation factor if-1 | DFS94_RS23845 | Not Available | - | 4831950 - 4832168 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | DFS94_RS23850 | Not Available | - | 4832453 - 4833157 | 26679.0 |
| heme abc transporter atp-binding protein/permease cydc | DFS94_RS23855 | Not Available | - | 4833199 - 4834920 | 62929.3 |
| heme abc transporter permease/atp-binding protein cydd | DFS94_RS23860 | Not Available | - | 4834921 - 4836687 | 65096.0 |
| thioredoxin-disulfide reductase | DFS94_RS23865 | Not Available | - | 4836810 - 4837775 | 34599.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism