Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | DFS94_RS21320 | Not Available | + | 4314426 - 4315277 | 32305.2 |
| porphobilinogen synthase | DFS94_RS21325 | Not Available | - | 4315317 - 4316291 | 35626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | DFS94_RS21330 | Not Available | + | 4316817 - 4319804 | 107116.0 |
| hydrogen peroxide resistance inhibitor ipra | DFS94_RS21335 | Not Available | + | 4319890 - 4320513 | 23930.0 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | DFS94_RS21340 | Not Available | - | 4320514 - 4321671 | 41941.5 |
| peptide antibiotic transporter sbma | DFS94_RS21345 | Not Available | + | 4322023 - 4323243 | 46506.1 |
| surface-exposed outer membrane lipoprotein yaiw | DFS94_RS21350 | Not Available | + | 4323256 - 4324350 | 40345.4 |
| yaiy family protein | DFS94_RS21355 | Not Available | - | 4324409 - 4324717 | 11425.2 |
| duf2754 domain-containing protein | DFS94_RS21360 | Not Available | + | 4324977 - 4325189 | 8097.92 |
| d-alanine--d-alanine ligase | DFS94_RS21365 | Not Available | - | 4325213 - 4326307 | 39347.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism