Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | + | 4281464 - 4281544 | Not Available |
| hypothetical protein | DFS94_RS21175 | Not Available | + | 4281534 - 4281778 | 8972.09 |
| lyse family transporter | DFS94_RS21180 | Not Available | - | 4281795 - 4282466 | 24871.0 |
| duf1471 family periplasmic protein yaho | DFS94_RS21185 | Not Available | + | 4282613 - 4282888 | 9871.9 |
| propionate catabolism operon regulatory protein prpr | DFS94_RS21190 | Not Available | - | 4282989 - 4284575 | 58662.0 |
| methylisocitrate lyase | DFS94_RS21195 | Not Available | + | 4284814 - 4285704 | 32121.5 |
| 2-methylcitrate synthase | DFS94_RS21200 | Not Available | + | 4285864 - 4287033 | 43118.5 |
| 2-methylcitrate dehydratase | DFS94_RS21205 | Not Available | + | 4287067 - 4288518 | 54040.8 |
| propionate--coa ligase | DFS94_RS21210 | Not Available | + | 4288558 - 4290444 | 69423.8 |
| cytosine permease | DFS94_RS21215 | Not Available | + | 4290769 - 4292028 | 43652.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism