Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein thiq | DFS94_RS19720 | Not Available | - | 3980773 - 3981471 | 25031.8 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DFS94_RS19725 | Not Available | - | 3981455 - 3983065 | 59474.6 |
| thiamine abc transporter substrate binding subunit | DFS94_RS19730 | Not Available | - | 3983041 - 3984024 | 36223.3 |
| dna-binding transcriptional regulator sgrr | DFS94_RS19735 | Not Available | - | 3984188 - 3985843 | 64123.9 |
| glucose uptake inhibitor sgrt | DFS94_RS19740 | Not Available | + | 3985932 - 3986063 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | DFS94_RS19745 | Not Available | - | 3986170 - 3986775 | 22604.8 |
| 3-isopropylmalate dehydratase large subunit | DFS94_RS19750 | Not Available | - | 3986786 - 3988186 | 49884.7 |
| 3-isopropylmalate dehydrogenase | DFS94_RS19755 | Not Available | - | 3988189 - 3989280 | 39503.2 |
| 2-isopropylmalate synthase | DFS94_RS19760 | Not Available | - | 3989280 - 3990851 | 57345.2 |
| leu operon leader peptide | DFS94_RS19765 | Not Available | - | 3990943 - 3991029 | 3146.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism