Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | DFS94_RS19040 | Not Available | + | 3833151 - 3834107 | 37205.9 |
| plp-dependent aminotransferase family protein | DFS94_RS19045 | Not Available | - | 3834350 - 3835762 | 53019.7 |
| duf1127 domain-containing protein | DFS94_RS19050 | Not Available | + | 3835939 - 3836103 | 6864.37 |
| endoribonuclease syme | DFS94_RS19055 | Not Available | - | 3836146 - 3836484 | 12383.9 |
| type i restriction endonuclease subunit r | DFS94_RS19060 | Not Available | - | 3836699 - 3839962 | 124940.0 |
| restriction endonuclease subunit s | DFS94_RS19065 | Not Available | - | 3840057 - 3841361 | 48974.2 |
| type i restriction-modification system subunit m | DFS94_RS19070 | Not Available | - | 3841351 - 3842970 | 60562.8 |
| restriction endonuclease | DFS94_RS19075 | Not Available | - | 3843034 - 3844200 | 44126.0 |
| brnt family toxin | DFS94_RS19080 | Not Available | + | 3844397 - 3844684 | 11157.3 |
| brna antitoxin family protein | DFS94_RS19085 | Not Available | + | 3844671 - 3844973 | 11592.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism