Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385

Accession NumberNZ_CP029420.1

Gene Summary

Adenine Count

1206723 bp

Thymine Count

1205119 bp

Guanine Count

1247224 bp

Cytosine Count

1251356 bp

Genome Length

4910422 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitDFS94_RS19520Not Available+3933667 - 393481541417.4
carbamoyl-phosphate synthase large subunitDFS94_RS19525Not Available+3934833 - 3938054117907.0
hypothetical proteinDFS94_RS19530Not Available-3938062 - 39382808180.97
carnitine metabolism transcriptional regulator caifDFS94_RS19535Not Available+3938315 - 393871015423.0
carnitine operon protein caieDFS94_RS19540Not Available-3938829 - 393941921161.6
crotonobetainyl-coa hydrataseDFS94_RS19545Not Available-3939425 - 394021028177.8
crotonobetaine/carnitine-coa ligaseDFS94_RS19550Not Available-3940319 - 394187258668.6
l-carnitine coa-transferaseDFS94_RS19555Not Available-3941945 - 394316245075.2
crotonobetainyl-coa dehydrogenaseDFS94_RS19560Not Available-3943291 - 394443342560.8
l-carnitine/gamma-butyrobetaine antiporterDFS94_RS19565Not Available-3944464 - 394597856624.4

Displaying genes 3921 – 3930 of 4943 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites