Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | DFS94_RS18845 | Not Available | - | 3792983 - 3794098 | 40407.2 |
| s-methyl-5-thioribose kinase | DFS94_RS18850 | Not Available | - | 3794108 - 3795367 | 47670.9 |
| hypothetical protein | DFS94_RS18855 | Not Available | - | 3796088 - 3797257 | 40799.8 |
| hypothetical protein | DFS94_RS18860 | Not Available | + | 3797320 - 3798426 | 41246.3 |
| hypothetical protein | DFS94_RS26050 | Not Available | - | 3798694 - 3798899 | 7758.52 |
| sialate o-acetylesterase | DFS94_RS18865 | Not Available | - | 3799009 - 3799989 | 36813.9 |
| n-acetylneuraminate epimerase | DFS94_RS18870 | Not Available | - | 3800053 - 3801159 | 39575.2 |
| n-acetylneuraminic acid outer membrane channel nanc | DFS94_RS18875 | Not Available | - | 3801179 - 3801895 | 27889.4 |
| hypothetical protein | DFS94_RS18880 | Not Available | + | 3803349 - 3803546 | 7504.22 |
| isl3-like element isec53 family transposase | DFS94_RS18885 | Not Available | - | 3803577 - 3804797 | 47011.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism