Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | DFS94_RS00650 | Not Available | + | 121596 - 121994 | 14950.7 |
| hydrogenase expression/formation protein | DFS94_RS00655 | Not Available | + | 121991 - 122848 | 31343.4 |
| cytochrome bd-ii oxidase subunit 1 | DFS94_RS00660 | Not Available | + | 122982 - 124526 | 57996.3 |
| cytochrome d ubiquinol oxidase subunit ii | DFS94_RS00665 | Not Available | + | 124538 - 125674 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | DFS94_RS00670 | Not Available | + | 125687 - 125779 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | DFS94_RS00675 | Not Available | + | 125859 - 127169 | 47578.1 |
| cold shock-like protein csph | DFS94_RS00680 | Not Available | - | 127157 - 127369 | 7720.48 |
| cold shock protein cspg | DFS94_RS00685 | Not Available | + | 127655 - 127867 | 7781.14 |
| cold-shock protein | DFS94_RS00690 | Not Available | + | 127878 - 128066 | 7104.55 |
| protein ymce | DFS94_RS00695 | Not Available | + | 128041 - 128271 | 8727.65 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism