Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DFS94_RS04690 | Not Available | - | 903836 - 904531 | 25163.2 |
| atp-dependent dna helicase | DFS94_RS04695 | Not Available | - | 904589 - 906499 | 70414.9 |
| rida family protein | DFS94_RS04700 | Not Available | + | 906631 - 906975 | 12493.9 |
| duf1889 family protein | DFS94_RS04705 | Not Available | + | 907397 - 907696 | 10821.9 |
| yoah family protein | DFS94_RS04710 | Not Available | - | 907816 - 907995 | 6554.7 |
| aminodeoxychorismate synthase component 1 | DFS94_RS04715 | Not Available | + | 908069 - 909430 | 50975.3 |
| coa pyrophosphatase | DFS94_RS04720 | Not Available | + | 909434 - 910012 | 21406.9 |
| l-serine ammonia-lyase | DFS94_RS04725 | Not Available | + | 910196 - 911560 | 48893.5 |
| eal domain-containing protein | DFS94_RS04730 | Not Available | + | 911691 - 913289 | 59577.7 |
| cnnm family cation transport protein yoae | DFS94_RS04735 | Not Available | - | 913293 - 914849 | 56545.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism