Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mate transporter mdtk | DFS94_RS03975 | Not Available | + | 765002 - 766375 | 49434.2 |
| aida repeat-containing protein | DFS94_RS03980 | Not Available | - | 766416 - 767672 | 42822.6 |
| Trna-val | Not Available | Not Available | + | 767980 - 768056 | Not Available |
| Trna-val | Not Available | Not Available | + | 768061 - 768137 | Not Available |
| monooxygenase | DFS94_RS03995 | Not Available | + | 768246 - 768551 | 11304.5 |
| fad-nad(p)-binding protein | DFS94_RS04000 | Not Available | + | 768677 - 770281 | 60685.3 |
| protein ydht | DFS94_RS04005 | Not Available | - | 770293 - 771105 | 29342.5 |
| thiosulfate reductase cytochrome b subunit | DFS94_RS04010 | Not Available | - | 771109 - 771894 | 29535.4 |
| 4fe-4s dicluster domain-containing protein | DFS94_RS04015 | Not Available | - | 771891 - 772559 | 25058.0 |
| ydhw family putative oxidoreductase system protein | DFS94_RS04020 | Not Available | - | 772623 - 773261 | 24138.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism