Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease dtpa | DFS94_RS03820 | Not Available | + | 738705 - 740207 | 54042.4 |
| glutathione transferase gsta | DFS94_RS03825 | Not Available | + | 740313 - 740918 | 22869.6 |
| pyridoxal kinase pdxy | DFS94_RS03830 | Not Available | - | 740962 - 741822 | 31204.8 |
| tyrosine--trna ligase | DFS94_RS03835 | Not Available | - | 741884 - 743158 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | DFS94_RS03840 | Not Available | - | 743287 - 743943 | 25546.6 |
| c-type lysozyme inhibitor | DFS94_RS03845 | Not Available | - | 744002 - 744331 | 12572.2 |
| anhydro-n-acetylmuramic acid kinase | DFS94_RS03850 | Not Available | - | 744429 - 745538 | 39512.7 |
| outer membrane lipoprotein slyb | DFS94_RS03855 | Not Available | + | 745812 - 746279 | 15628.7 |
| transcriptional regulator slya | DFS94_RS03860 | Not Available | - | 746326 - 746760 | 16381.1 |
| duf1656 domain-containing protein | DFS94_RS03865 | Not Available | + | 746961 - 747197 | 8905.36 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism