Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385

Accession NumberNZ_CP029420.1

Gene Summary

Adenine Count

1206723 bp

Thymine Count

1205119 bp

Guanine Count

1247224 bp

Cytosine Count

1251356 bp

Genome Length

4910422 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
kpn_01571 family proteinDFS94_RS26190Not Available-696913 - 6970324369.63
acid resistance repetitive basic protein asrDFS94_RS03620Not Available+697287 - 69759510531.7
hypothetical proteinDFS94_RS03625Not Available+697688 - 6977713206.2
trypsin-like serine peptidaseDFS94_RS03630Not Available+697871 - 69869229250.6
multidrug/spermidine efflux smr transporter subunit mdtiDFS94_RS03635Not Available-698731 - 69906011720.8
multidrug/spermidine efflux smr transporter subunit mdtjDFS94_RS03640Not Available-699047 - 69941213115.7
ai-2 transporter tqsaDFS94_RS03650Not Available+699824 - 70085837545.3
re/si-specific nad(p)(+) transhydrogenase subunit betaDFS94_RS03655Not Available-700883 - 70227148740.1
re/si-specific nad(p)(+) transhydrogenase subunit alphaDFS94_RS03660Not Available-702282 - 70381454626.6
duf1471 family protein ydghDFS94_RS03665Not Available+704338 - 70528233874.9

Displaying genes 911 – 920 of 4943 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites