Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenate/tellurate reductase subunit ynfe | DFS94_RS03565 | Not Available | + | 684833 - 687259 | 89519.7 |
| hypothetical protein | DFS94_RS25520 | Not Available | + | 687320 - 688889 | 56789.8 |
| dmso reductase like molybdoenzyme iron-sulfur subunit ynfg | DFS94_RS03580 | Not Available | + | 688900 - 689517 | 22752.9 |
| selenate reductase membrane anchor subunit ynfh | DFS94_RS03585 | Not Available | + | 689519 - 690373 | 30544.6 |
| tat proofreading chaperone dmsd | DFS94_RS03590 | Not Available | + | 690416 - 691030 | 23349.8 |
| voltage-gated clc-type chloride channel clcb | DFS94_RS03595 | Not Available | + | 691191 - 692483 | 45631.0 |
| dethiobiotin synthase | DFS94_RS03600 | Not Available | - | 692436 - 693131 | 24968.4 |
| hypothetical protein | DFS94_RS03605 | Not Available | - | 693256 - 694475 | 44969.5 |
| lysr family transcriptional regulator | DFS94_RS03610 | Not Available | - | 694610 - 695503 | 33333.4 |
| mfs transporter | DFS94_RS03615 | Not Available | + | 695610 - 696863 | 45220.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism