Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | DFS94_RS03515 | Not Available | + | 676447 - 676650 | 7276.83 |
| mannitol dehydrogenase family protein | DFS94_RS03520 | Not Available | - | 676686 - 678146 | 53817.4 |
| mhs family mfs transporter ydfj | DFS94_RS03525 | Not Available | - | 678235 - 679602 | 49350.7 |
| zn-dependent oxidoreductase | DFS94_RS03530 | Not Available | - | 679660 - 680679 | 36582.1 |
| starvation-sensing protein rspa | DFS94_RS03535 | Not Available | - | 680691 - 681905 | 45985.0 |
| ynfa family protein | DFS94_RS03540 | Not Available | - | 682111 - 682437 | 11920.2 |
| duf1283 family protein | DFS94_RS03545 | Not Available | + | 682572 - 682913 | 13002.5 |
| spermidine n1-acetyltransferase | DFS94_RS03550 | Not Available | + | 682948 - 683508 | 21902.3 |
| ynfc family lipoprotein | DFS94_RS03555 | Not Available | - | 683511 - 684221 | 26515.3 |
| duf1161 domain-containing protein | DFS94_RS03560 | Not Available | + | 684329 - 684634 | 10605.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism