Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | DFS94_RS03365 | Not Available | - | 648392 - 648922 | 18882.5 |
| fimbria/pilus outer membrane usher protein | DFS94_RS03370 | Not Available | - | 648936 - 651587 | 96573.2 |
| fimbria/pilus periplasmic chaperone | DFS94_RS03375 | Not Available | - | 651629 - 652339 | 26134.8 |
| type 1 fimbrial major subunit fima | DFS94_RS03380 | Not Available | - | 652701 - 653264 | 19113.5 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | DFS94_RS03395 | Not Available | - | 654175 - 655497 | 49332.7 |
| type ii toxin-antitoxin system antitoxin hipb | DFS94_RS03400 | Not Available | - | 655497 - 655763 | 9987.87 |
| trans-aconitate 2-methyltransferase | DFS94_RS03405 | Not Available | + | 656071 - 656829 | 29049.5 |
| bestrophin family protein | DFS94_RS03410 | Not Available | - | 656833 - 657747 | 34839.0 |
| tagaturonate reductase | DFS94_RS03415 | Not Available | - | 657944 - 659395 | 54807.4 |
| diguanylate cyclase | DFS94_RS03420 | Not Available | - | 659622 - 661040 | 52093.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism