Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acid resistance gamma-aminobutyrate antiporter gadc | DFS94_RS03310 | Not Available | - | 635334 - 636869 | 55094.0 |
| glutamate decarboxylase | DFS94_RS03315 | Not Available | - | 637025 - 638425 | 52671.0 |
| hypothetical protein | DFS94_RS03325 | Not Available | - | 638787 - 639698 | 33860.0 |
| anaerobic sulfatase maturase | DFS94_RS03330 | Not Available | - | 639710 - 640867 | 44566.4 |
| sulfatase-like hydrolase/transferase | DFS94_RS03335 | Not Available | - | 640919 - 642601 | 62845.6 |
| acid stress response transcriptional regulator ydeo | DFS94_RS03340 | Not Available | - | 643003 - 643764 | 28889.0 |
| two-component system connector safa | DFS94_RS03345 | Not Available | - | 643839 - 644036 | 7346.19 |
| acid resistance putative oxidoreductase ydep | DFS94_RS03350 | Not Available | - | 644284 - 646563 | 83502.8 |
| fimbrial protein | DFS94_RS03355 | Not Available | - | 646902 - 647816 | 31990.3 |
| fimbrial protein | DFS94_RS03360 | Not Available | - | 647876 - 648379 | 18231.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism