Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DFS94_RS02865 | Not Available | - | 534658 - 535473 | 30556.3 |
| hlyd family secretion protein | DFS94_RS02870 | Not Available | + | 535570 - 536598 | 37749.3 |
| dha2 family efflux mfs transporter permease subunit | DFS94_RS02875 | Not Available | + | 536595 - 538109 | 55581.9 |
| dna endonuclease smra | DFS94_RS02880 | Not Available | + | 538304 - 538867 | 21573.8 |
| diguanylate cyclase dgcm | DFS94_RS02885 | Not Available | - | 538888 - 540120 | 46557.9 |
| protein ynan | DFS94_RS25700 | Not Available | + | 540314 - 540361 | 1992.58 |
| zinc transporter zntb | DFS94_RS02890 | Not Available | + | 540375 - 541358 | 36614.3 |
| protein ynal | DFS94_RS26130 | Not Available | + | 541633 - 541806 | 6427.87 |
| atp-dependent rna helicase dbpa | DFS94_RS02900 | Not Available | + | 541836 - 543209 | 49158.7 |
| trna 2-thiocytidine(32) synthetase ttca | DFS94_RS02905 | Not Available | - | 543337 - 544272 | 35489.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism