Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DFS94_RS02765 | Not Available | + | 515293 - 516375 | 40080.9 |
| monomeric porin ompg | DFS94_RS02770 | Not Available | + | 516420 - 517325 | 34883.0 |
| laci family dna-binding transcriptional regulator | DFS94_RS02775 | Not Available | - | 517376 - 518374 | 36145.2 |
| ycjx family protein | DFS94_RS02780 | Not Available | + | 518530 - 519927 | 52629.6 |
| ycjf family protein | DFS94_RS02785 | Not Available | + | 519924 - 520985 | 39394.5 |
| transcriptional regulator tyrr | DFS94_RS02790 | Not Available | + | 521133 - 522674 | 57657.5 |
| thiol peroxidase | DFS94_RS02795 | Not Available | - | 522718 - 523224 | 17836.3 |
| l-ala-d/l-glu epimerase | DFS94_RS02800 | Not Available | + | 523343 - 524308 | 34719.1 |
| murein tripeptide amidase mpaa | DFS94_RS02805 | Not Available | - | 524283 - 525011 | 26554.3 |
| sdr family oxidoreductase | DFS94_RS02810 | Not Available | - | 525302 - 525940 | 23339.2 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism