Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | DFS94_RS22470 | Not Available | - | 4556639 - 4558171 | 55171.9 |
| citrate (pro-3s)-lyase subunit beta | DFS94_RS22475 | Not Available | - | 4558182 - 4559090 | 33111.6 |
| citrate lyase acyl carrier protein | DFS94_RS22480 | Not Available | - | 4559087 - 4559383 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | DFS94_RS22485 | Not Available | - | 4559398 - 4560456 | 40079.5 |
| sensor histidine kinase dpib | DFS94_RS22490 | Not Available | + | 4560836 - 4562458 | 60266.0 |
| two-component response regulator dpia | DFS94_RS22495 | Not Available | + | 4562427 - 4563107 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | DFS94_RS22500 | Not Available | - | 4563148 - 4564533 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | DFS94_RS22505 | Not Available | + | 4565120 - 4565680 | 21817.6 |
| transcription antiterminator/rna stability regulator cspe | DFS94_RS22510 | Not Available | + | 4565855 - 4566064 | 7463.84 |
| fluoride efflux transporter crcb | DFS94_RS22515 | Not Available | - | 4566118 - 4566501 | 13766.1 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism