Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-3',5'-guanylate-activated glycosyltransferase nrfb | DFS94_RS22175 | Not Available | - | 4491100 - 4493337 | 85324.3 |
| cu(+)/ag(+) sensor histidine kinase cuss | DFS94_RS22180 | Not Available | - | 4493487 - 4494929 | 53764.2 |
| copper response regulator transcription factor cusr | DFS94_RS22185 | Not Available | - | 4494919 - 4495602 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | DFS94_RS22190 | Not Available | + | 4495759 - 4497141 | 50667.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | DFS94_RS22195 | Not Available | + | 4497165 - 4497497 | 12237.8 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | DFS94_RS22200 | Not Available | + | 4497513 - 4498736 | 44297.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | DFS94_RS22205 | Not Available | + | 4498748 - 4501891 | 114705.0 |
| phenylalanine transporter | DFS94_RS22210 | Not Available | + | 4501993 - 4503375 | 50861.6 |
| mechanosensitive ion channel ybdg | DFS94_RS22215 | Not Available | - | 4503533 - 4504780 | 46639.5 |
| oxygen-insensitive nad(p)h nitroreductase | DFS94_RS22220 | Not Available | - | 4504888 - 4505541 | 23994.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism