Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | DFS94_RS22115 | Not Available | - | 4481640 - 4482161 | 19598.6 |
| ribosome-associated protein ybcj | DFS94_RS22120 | Not Available | - | 4482269 - 4482481 | 7374.98 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DFS94_RS22125 | Not Available | - | 4482483 - 4483349 | 30957.5 |
| Trna-arg | Not Available | Not Available | + | 4483620 - 4483696 | Not Available |
| hypothetical protein | DFS94_RS25635 | Not Available | - | 4483712 - 4484313 | 21462.6 |
| hypothetical protein | DFS94_RS22145 | Not Available | + | 4484320 - 4484694 | 13756.0 |
| class i sam-dependent methyltransferase | DFS94_RS22155 | Not Available | - | 4484749 - 4485417 | 24504.5 |
| omptin family outer membrane protease ompt | DFS94_RS22160 | Not Available | - | 4485649 - 4486602 | 35563.1 |
| duf4434 family protein | DFS94_RS22165 | Not Available | - | 4487250 - 4488140 | 33114.7 |
| bacteriophage adsorption protein nfra | DFS94_RS22170 | Not Available | - | 4488141 - 4491113 | 111389.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism