Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase fdra | DFS94_RS22065 | Not Available | + | 4471531 - 4473198 | 58571.4 |
| duf1116 domain-containing protein | DFS94_RS22070 | Not Available | + | 4473208 - 4474467 | 44927.6 |
| duf2877 domain-containing protein | DFS94_RS22075 | Not Available | + | 4474478 - 4475293 | 29667.9 |
| carbamate kinase | DFS94_RS22080 | Not Available | + | 4475290 - 4476183 | 31673.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DFS94_RS22085 | Not Available | - | 4476717 - 4477784 | 39439.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DFS94_RS22090 | Not Available | - | 4477781 - 4478290 | 17781.3 |
| hypothetical protein | DFS94_RS22095 | Not Available | - | 4478386 - 4478715 | 12241.1 |
| udp-2,3-diacylglucosamine diphosphatase | DFS94_RS22100 | Not Available | - | 4478826 - 4479548 | 26876.6 |
| peptidylprolyl isomerase b | DFS94_RS22105 | Not Available | - | 4479551 - 4480045 | 18154.5 |
| cysteine--trna ligase | DFS94_RS22110 | Not Available | + | 4480219 - 4481604 | 52186.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism