Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter permease subunit ybbp | DFS94_RS21960 | Not Available | + | 4447657 - 4450071 | 89184.4 |
| is1 family transposase | DFS94_RS21970 | Not Available | + | 4450446 - 4451143 | 26568.3 |
| type vi secretion system tube protein tssd | DFS94_RS21975 | Not Available | + | 4451145 - 4453019 | 70576.4 |
| duf2931 family protein | DFS94_RS21980 | Not Available | + | 4453009 - 4453668 | 25077.1 |
| duf2931 family protein | DFS94_RS21985 | Not Available | + | 4453675 - 4454343 | 25492.9 |
| duf2931 family protein | DFS94_RS21990 | Not Available | + | 4454350 - 4455018 | 25449.7 |
| trna 2-selenouridine(34) synthase mnmh | DFS94_RS21995 | Not Available | - | 4455070 - 4456176 | 41630.7 |
| hth-type transcriptional activator alls | DFS94_RS22000 | Not Available | - | 4456245 - 4457171 | 34557.7 |
| ureidoglycolate lyase | DFS94_RS22005 | Not Available | + | 4457401 - 4457883 | 18222.7 |
| hth-type transcriptional repressor allr | DFS94_RS22010 | Not Available | + | 4457961 - 4458776 | 29314.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism