Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFS94_RS21865 | Not Available | - | 4431496 - 4431999 | 19684.3 |
| duf6896 domain-containing protein | DFS94_RS21870 | Not Available | - | 4431996 - 4432796 | 30846.1 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | DFS94_RS21875 | Not Available | - | 4432820 - 4433299 | 17123.9 |
| trab/gumn family protein | DFS94_RS21880 | Not Available | - | 4433503 - 4434297 | 29876.2 |
| type ii toxin-antitoxin system rele/pare family toxin | DFS94_RS21885 | Not Available | + | 4434430 - 4434732 | 11810.1 |
| higa family addiction module antitoxin | DFS94_RS21890 | Not Available | + | 4434768 - 4435109 | 13171.8 |
| copper-exporting p-type atpase copa | DFS94_RS21895 | Not Available | - | 4435167 - 4437671 | 87960.5 |
| glutaminase a | DFS94_RS21900 | Not Available | + | 4437933 - 4438865 | 32891.1 |
| apc family permease | DFS94_RS21905 | Not Available | + | 4438868 - 4440160 | 45656.6 |
| hypothetical protein | DFS94_RS26070 | Not Available | + | 4440191 - 4440288 | 3637.51 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism