Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | DFS94_RS21615 | Not Available | - | 4373792 - 4375783 | 74354.1 |
| cytochrome o ubiquinol oxidase subunit ii | DFS94_RS21620 | Not Available | - | 4375805 - 4376752 | 34899.1 |
| muropeptide mfs transporter ampg | DFS94_RS21625 | Not Available | - | 4377212 - 4378687 | 53320.4 |
| lipoprotein | DFS94_RS21630 | Not Available | - | 4378731 - 4379309 | 20951.3 |
| transcriptional regulator bola | DFS94_RS21635 | Not Available | + | 4379614 - 4379931 | 11994.3 |
| trigger factor | DFS94_RS21640 | Not Available | + | 4380275 - 4381573 | 48253.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DFS94_RS21645 | Not Available | + | 4381819 - 4382442 | 23188.1 |
| atp-dependent protease atp-binding subunit clpx | DFS94_RS21650 | Not Available | + | 4382568 - 4383842 | 46319.6 |
| endopeptidase la | DFS94_RS21655 | Not Available | + | 4384030 - 4386384 | 87443.4 |
| nucleoid-associated protein hu-beta | DFS94_RS21660 | Not Available | + | 4386593 - 4386865 | 9226.08 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism