Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-specific channel-forming protein tsx | DFS94_RS21515 | Not Available | - | 4356396 - 4357280 | 33625.6 |
| duf3251 domain-containing protein | DFS94_RS21520 | Not Available | - | 4357579 - 4358118 | 19563.6 |
| transcriptional regulator nrdr | DFS94_RS21525 | Not Available | + | 4358269 - 4358718 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DFS94_RS21530 | Not Available | + | 4358722 - 4359825 | 40396.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | DFS94_RS21535 | Not Available | + | 4359914 - 4360384 | 16157.4 |
| transcription antitermination factor nusb | DFS94_RS21540 | Not Available | + | 4360404 - 4360823 | 15689.9 |
| thiamine-phosphate kinase | DFS94_RS21545 | Not Available | + | 4360901 - 4361878 | 35072.8 |
| phosphatidylglycerophosphatase a | DFS94_RS21550 | Not Available | + | 4361856 - 4362374 | 19491.4 |
| 1-deoxyxylulose-5-phosphate synthase yajo | DFS94_RS21555 | Not Available | - | 4362428 - 4363402 | 36450.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DFS94_RS21560 | Not Available | - | 4363457 - 4365319 | 67636.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism