Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transporter carrier protein brnq | DFS94_RS21465 | Not Available | + | 4344997 - 4346316 | 46225.5 |
| proline-specific permease proy | DFS94_RS21470 | Not Available | + | 4346392 - 4347765 | 50218.8 |
| maltodextrin glucosidase | DFS94_RS21475 | Not Available | + | 4347921 - 4349738 | 69222.0 |
| acp phosphodiesterase | DFS94_RS21480 | Not Available | - | 4349743 - 4350324 | 23022.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DFS94_RS21485 | Not Available | + | 4350417 - 4351487 | 39432.1 |
| trna guanosine(34) transglycosylase tgt | DFS94_RS21490 | Not Available | + | 4351542 - 4352669 | 42596.1 |
| preprotein translocase subunit yajc | DFS94_RS21495 | Not Available | + | 4352692 - 4353024 | 11887.9 |
| protein translocase subunit secd | DFS94_RS21500 | Not Available | + | 4353052 - 4354899 | 66609.3 |
| protein translocase subunit secf | DFS94_RS21505 | Not Available | + | 4354910 - 4355881 | 35384.6 |
| hnh nuclease yajd | DFS94_RS21510 | Not Available | + | 4356011 - 4356358 | 13364.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism