Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytosine/isoguanine deaminase | DFS94_RS21220 | Not Available | + | 4292018 - 4293301 | 47640.9 |
| galactoside o-acetyltransferase | DFS94_RS21225 | Not Available | - | 4293422 - 4294033 | 22787.3 |
| lactose permease | DFS94_RS21230 | Not Available | - | 4294099 - 4295352 | 46514.9 |
| hypothetical protein | DFS94_RS21235 | Not Available | - | 4295404 - 4298483 | 112868.0 |
| dna-binding transcriptional repressor laci | DFS94_RS21240 | Not Available | - | 4298606 - 4299688 | 38634.6 |
| dna-binding transcriptional regulator | DFS94_RS21245 | Not Available | - | 4299765 - 4300598 | 31295.0 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | DFS94_RS21250 | Not Available | + | 4300789 - 4302453 | 62216.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | DFS94_RS21255 | Not Available | + | 4302455 - 4303399 | 34198.0 |
| 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | DFS94_RS21260 | Not Available | + | 4303417 - 4304283 | 31939.3 |
| 2-keto-4-pentenoate hydratase | DFS94_RS21265 | Not Available | + | 4304293 - 4305102 | 28849.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism