Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein ykgh | DFS94_RS21070 | Not Available | - | 4255949 - 4256617 | 25483.1 |
| outer membrane autotransporter hyxb | DFS94_RS26175 | Not Available | - | 4256801 - 4259092 | 79005.1 |
| protein hyxa | DFS94_RS21085 | Not Available | - | 4259134 - 4259895 | 28239.4 |
| luxr family transcriptional regulator hyxr | DFS94_RS21090 | Not Available | - | 4260049 - 4260843 | 29587.3 |
| tyrosine-type dna invertase ipba | DFS94_RS21095 | Not Available | - | 4261173 - 4261736 | 21803.6 |
| choline dehydrogenase | DFS94_RS21105 | Not Available | - | 4262821 - 4264491 | 61883.3 |
| betaine-aldehyde dehydrogenase | DFS94_RS21110 | Not Available | - | 4264505 - 4265977 | 52898.2 |
| transcriptional regulator beti | DFS94_RS21115 | Not Available | - | 4265991 - 4266578 | 21776.4 |
| choline bcct transporter bett | DFS94_RS21120 | Not Available | + | 4266707 - 4268740 | 75873.5 |
| dna-binding transcriptional activator/c-di-gmp phosphodiesterase pdel | DFS94_RS21125 | Not Available | + | 4269618 - 4270706 | 40758.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism