Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan meso-diaminopimelic acid protein amidase | DFS94_RS20555 | Not Available | - | 4158663 - 4159403 | 28022.8 |
| c40 family peptidase | DFS94_RS20560 | Not Available | + | 4159715 - 4160464 | 28940.7 |
| rep-associated tyrosine transposase rayt | DFS94_RS20565 | Not Available | + | 4160640 - 4161137 | 20056.7 |
| flagellar biosynthesis protein flha | DFS94_RS20570 | Not Available | - | 4161357 - 4163450 | 75711.6 |
| flagellar type iii secretion system protein flhb | DFS94_RS20575 | Not Available | - | 4163434 - 4164573 | 42759.6 |
| flagellar biosynthetic protein flir | DFS94_RS20580 | Not Available | - | 4164563 - 4165345 | 28724.3 |
| flagellar biosynthetic protein fliq | DFS94_RS20585 | Not Available | - | 4165347 - 4165619 | 9684.52 |
| flagellar type iii secretion system pore protein flip | DFS94_RS20590 | Not Available | - | 4165622 - 4166374 | 27154.8 |
| flim/flin family flagellar motor switch protein | DFS94_RS20595 | Not Available | - | 4166371 - 4166742 | 13528.3 |
| flim/flin family flagellar motor switch protein | DFS94_RS20600 | Not Available | - | 4166735 - 4167586 | 31659.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism