Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | + | 4141064 - 4141140 | Not Available |
| Trna-ala | Not Available | Not Available | + | 4141183 - 4141258 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 4141442 - 4144345 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 4144448 - 4144563 | Not Available |
| Trna-asp | Not Available | Not Available | + | 4144618 - 4144694 | Not Available |
| 2,5-didehydrogluconate reductase dkgb | DFS94_RS20480 | Not Available | + | 4144857 - 4145660 | 29516.4 |
| dna-binding transcriptional regulator yafc | DFS94_RS20485 | Not Available | - | 4145657 - 4146571 | 33706.7 |
| endonuclease/exonuclease/phosphatase family protein | DFS94_RS20490 | Not Available | + | 4146812 - 4147612 | 29993.4 |
| class i sam-dependent methyltransferase | DFS94_RS20495 | Not Available | + | 4147690 - 4148460 | 28237.3 |
| murein transglycosylase d | DFS94_RS20500 | Not Available | - | 4148509 - 4149867 | 49420.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism