Escherichia coli str. 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological temperature of its host-associated habitat. E. coli str. 3385 is classified as a facultative anaerobe, indicating its capacity to grow in both the presence and absence of oxygen. The ability to adapt to varying oxygen conditions may provide this strain with a metabolic flexibility that is advantageous in diverse environments, particularly within host organisms. While the specific ecological role of E. coli str. 3385 is not detailed, the general adaptability of E. coli species to the gastrointestinal tract of mammals suggests potential involvement in nutrient processing or microbial community dynamics. Understanding the precise interactions and functions of E. coli str. 3385 within its host could offer insights into microbial ecology and host-microbe interactions, which are crucial for maintaining gut health and homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 3385
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 3385

Accession NumberNZ_CP029420.1

Gene Summary

Adenine Count

1206723 bp

Thymine Count

1205119 bp

Guanine Count

1247224 bp

Cytosine Count

1251356 bp

Genome Length

4910422 bp

Protein-coding Genes

4462 genes

Non-Coding Genes

365 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
envelope stress response activation lipoprotein nlpeDFS94_RS20405Not Available+4130999 - 413170925820.7
yaef family permuted papain-like enzymeDFS94_RS20410Not Available-4131865 - 413268929989.0
proline--trna ligaseDFS94_RS20415Not Available-4132742 - 413446063652.3
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoDFS94_RS20420Not Available-4134571 - 413527826379.8
rcs stress response system protein rcsfDFS94_RS20425Not Available-4135275 - 413567914164.3
methionine abc transporter substrate-binding lipoprotein metqDFS94_RS20430Not Available-4135797 - 413661229433.3
methionine abc transporter permease metiDFS94_RS20435Not Available-4136652 - 413730523271.7
methionine abc transporter atp-binding protein metnDFS94_RS20440Not Available-4137298 - 413832937804.7
d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphataseDFS94_RS20445Not Available+4138517 - 413908921146.2
16s ribosomal rnaNot AvailableNot Available+4139454 - 4140995Not Available

Displaying genes 4101 – 4110 of 4943 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites