Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response activation lipoprotein nlpe | DFS94_RS20405 | Not Available | + | 4130999 - 4131709 | 25820.7 |
| yaef family permuted papain-like enzyme | DFS94_RS20410 | Not Available | - | 4131865 - 4132689 | 29989.0 |
| proline--trna ligase | DFS94_RS20415 | Not Available | - | 4132742 - 4134460 | 63652.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DFS94_RS20420 | Not Available | - | 4134571 - 4135278 | 26379.8 |
| rcs stress response system protein rcsf | DFS94_RS20425 | Not Available | - | 4135275 - 4135679 | 14164.3 |
| methionine abc transporter substrate-binding lipoprotein metq | DFS94_RS20430 | Not Available | - | 4135797 - 4136612 | 29433.3 |
| methionine abc transporter permease meti | DFS94_RS20435 | Not Available | - | 4136652 - 4137305 | 23271.7 |
| methionine abc transporter atp-binding protein metn | DFS94_RS20440 | Not Available | - | 4137298 - 4138329 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | DFS94_RS20445 | Not Available | + | 4138517 - 4139089 | 21146.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 4139454 - 4140995 | Not Available |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism