Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. 3385
Accession NumberNZ_CP029420.1
Gene Summary
Adenine Count
1206723 bp
Thymine Count
1205119 bp
Guanine Count
1247224 bp
Cytosine Count
1251356 bp
Genome Length
4910422 bp
Protein-coding Genes
4462 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | DFS94_RS20355 | Not Available | + | 4120224 - 4120820 | 21483.2 |
| dna polymerase iii subunit alpha | DFS94_RS20360 | Not Available | + | 4120857 - 4124339 | 129914.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DFS94_RS20365 | Not Available | + | 4124352 - 4125311 | 35243.6 |
| lysine decarboxylase ldcc | DFS94_RS20370 | Not Available | + | 4125409 - 4127550 | 80549.8 |
| voc family protein | DFS94_RS20375 | Not Available | + | 4127607 - 4127996 | 14739.5 |
| trna lysidine(34) synthetase tils | DFS94_RS20380 | Not Available | + | 4128061 - 4129374 | 48722.6 |
| rho-binding antiterminator | DFS94_RS20385 | Not Available | - | 4129408 - 4129668 | 9640.41 |
| yaep family protein | DFS94_RS20390 | Not Available | - | 4129655 - 4129855 | 7214.59 |
| yaeq family protein | DFS94_RS20395 | Not Available | + | 4130021 - 4130566 | 20847.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | DFS94_RS20400 | Not Available | + | 4130563 - 4130985 | 15611.9 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism